Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850182.1_cds_XP_016511055.1_23832
CDS Infomation

[gene=LOC107828288] [db_xref=GeneID:107828288] [protein=RNA-binding protein 28-like] [protein_id=XP_016511055.1] [location=complement(join(74257..74987,75089..75218,75299..75467,76661..76731,76825..77038,77110..77602,79143..79257,80265..80319,80396..80478,80607..80657,81979..82118,83105..83238,84307..84394,85275..85361,86670..86756,86849..86979,87443..87479,87690..87750,87860..87958))] [gbkey=CDS]
Sequence

ATGGGAAAGAATAAAAAGACGATGTCTAATGGCGATAGCCAACATTCACCTGCCACCATA
TTCGTTAACAATTTACCTTATTCTTTCACTAATGCCCAGTTGGAAGAGACGTTCAGTGAA
GTTGGACCAATTAGGCGATGCTTTATGGTTACAAATAAAGGTTCAAGCGAGCACCGAGGC
TTCGGCTTTGTGCAATTTGCATCTGTAGACGACGCTAACCGTTCCATCGAGCTAAAAAAT
GGCACAGTGGTTGGAGGAAGGAAAATTGGAGTTAAACAAGCTATGCAACGTGCACCCCGC
GAACAACGTCGATCAAAGGGGGATCAAGAAAGCACCGCTGATGCAAAAGATGCCAAGGAC
GTTCCTTCTACTGAAATAGTCAAGCATGAACAAGCTTCAAGCTCTCGAGGAAAAGAAAGC
ACTGCTCATAAAGAAGACGACAAGGATGGTCCTTCTACTGAAATAGTTAAGAAGAAACAA
GCTTCAAACTCGCAGGGAACAGAAAACCTAGGAAAACCCACTAAAAAAAGAAAGTCTGCA
TTGCTTTGTGATGGTGCTGCTGAAGAAGGAAATTATTCAGGAAAACAGAGGGTCGCCAAG
ACAGTTATAATAGGAGGTATTGTAAATGCGGATATGGCAAAGGAGGTTCACCAGCTTGCG
CAGAAGTGTGGCACCGTATGTTCTGTTACTTACCCTCTTCCAAAAGAAGAGATTGAAAGT
CATGGGCTAGCACACGATGGTTGTAAGATGGATGCTTCATCTGTACTTTTCACTAGTGTC
AAATCAGCTCAAGCTTGTGTTGCATCATTACACCAAAAAGAAGTAAATGGAGCAACACTT
TGGGCACGCCAACTTGGTGGAGAGGGCTCAAAGACACAAAGGTGGAAACTTATAGTGAGG
AATCTTCCTTTTAAGGCCAAAGTGAATGAGATAAAAGATCTGTTTTCAAAAGTTGGCTTC
GTGTGGTATGTGGTTATTCCTAAGAATTCTGAGACAGGGTTATCAAAAGGATTTGCGTTT
GTCAAATTTACGTCGAAGCAGGATGCAGAGAATGTTATTAAGACATTTAATGGGAAAACA
TTGAGTAAACGAACTATTGCAGTTGATTGGGCCGTATCAAAAAAGGTTTATGCAGCTGGT
GGTCAATCTTCAGCAACCGTACAAGATGGACAGGACGCAAAAGATGATAGTAGTAGCGAT
ACGGATGAAGACATTGAAATTGATGGAAAATCTCAGCAAGCCGAAGAGGACGGAGATGAC
TCTCACCTTTTAGAAGAAGAAAATAACCAGACTGAAGTTAATTTTGACGAAGAGGCAAAC
ATTGCGAAAAAAGTTCTTCAGAATTTCATTTCTCCAACTTCAATAGGGCCAACTACTTCT
ACAAATGATTTTTCAGGCCTTCCCAAGCAGGGGAAGGATGTTGAAACTATTCTCCCACCA
GATGAACCACTGGGTGCATCTACGGCAAATAAAACACCACACGACAATTTAGACAAGAGC
AAAGAGATTAATGCTGGGCAGAGTGAGGGAGCAGATGATCTGCAGGGAACAGTTTTCATT
AGCAACCTTCCTTTTGATGTTGATAATAAAGAAGTCAAACAACGGTTTTCTGCTTTTGGT
GAAGTGGAATACTTTGCTCCGGTTCTTGACCGAGTCACCAAGCGACCAAAGGGTACTGGT
TTTCTCAAATTTAAAACAGCAGAGGCTGCTGAAGCTACTGTTTCCGCTGCCAATGTTGTG
GATGGTTTGGGTGTCTTTCTGAAGGGTCGGCAATTAAAGATTTTGAAGGCTTTGGACAAG
AAAGCTGCTCATGATAAGGAGTTGGAGAAGGCCAAAAAGGAGGATAATGACCACCGCAAC
CTTTACCTGGCAAAGGAGGGTCTTATTGTGGAGGGGACCCCAGCTGCTGCAGGTGTTTCA
GTGAGTGATATGTCAAAGCGCAAGGGGCTTCAAGAAAAGAAGATGATCAAGCTGAAATCC
CCAAATTTCCATGTGTCAAGGACACGGCTGATTGTATACAATCTTCCCAAGTCGATGAGT
GAAAAACAGCTGAAGACACTTTGCATTGATGCAGTTACCTCTCGTGCTACTAAGCAAAAG
CCTGTGATCCGGCAGATAAAGTTTTTGAAGGATGTGAAAAAAGGACAAGTAGTAGCAAAG
AATCATTCTCGCGGAGTAGCTTTTCTTGAGTTCTCAGAGCATCAACATGCACTTGTGGCT
TTAAGAGTTCTCAACAACAATCCTGAGACTTTTGGTCCTGAGCATCGTCCAATAGTGGAG
TTTGCTCTTGATAATGTGCAAACAATGAAGCTTCGTAATCAGAAACTTCAGCAGCAAGGT
TTTAACAAGAACAGAGAAGATCTGCAGCAGAATGCCAATAAAACTGAACTGAATCCCCGT
GATAAACAGTCAAGAAAACGCAAGTCCAGTGGGGACACATCAGTTGCTGGGAATAGAGAT
GTAGTGAAAAGCAAACGTGTCAGAGGTGCCACCGCAGAGGAAGGCAATGGGTCATCAGTT
TCAGGGAGTAAAGATGGAGATGAACTGAAAAATAGAGGTGCCAGAGGAACCAACTCCGAA
GAAGAAAGAGATGAGAAGAAGAATAACAAGAAGGAAGGTAAGAAGCTTGGAGGCACGAAA
CAAAAGCCAAAAGATAATCAAGAAGGAAAAAAGCTTGGCAGGTTTGGAAATGAACATTCA
GATAATGCTGCTCTCAAGGTTGGACATAAAGAAGATGTTGCAGTGAGAACAAAAAGGAGG
AAGTTGGAAGATAAAACTAACCAACAGAAACAAACTATGAGTTTACAGGTCAAGAAAAAG
GATAAAAAGAATAAAAACCCGGCGGGACGGGATGCTGAGGACAAGTTGGATATGCTGATT
GAGCAATACAGATCCAAATTCACAAACAACAGTTCTAATCAAACTGATAGTAAGCAGCAG
GGCTCTAAACAGCTTAAAAAGTGGTTCCAATCCTAA

Peptide Sequence

PEP ID

XP_016511055.1
PEP Infomation

PREDICTED: RNA-binding protein 28-like [Nicotiana tabacum]
Sequence

MGKNKKTMSNGDSQHSPATIFVNNLPYSFTNAQLEETFSEVGPIRRCFMVTNKGSSEHRG
FGFVQFASVDDANRSIELKNGTVVGGRKIGVKQAMQRAPREQRRSKGDQESTADAKDAKD
VPSTEIVKHEQASSSRGKESTAHKEDDKDGPSTEIVKKKQASNSQGTENLGKPTKKRKSA
LLCDGAAEEGNYSGKQRVAKTVIIGGIVNADMAKEVHQLAQKCGTVCSVTYPLPKEEIES
HGLAHDGCKMDASSVLFTSVKSAQACVASLHQKEVNGATLWARQLGGEGSKTQRWKLIVR
NLPFKAKVNEIKDLFSKVGFVWYVVIPKNSETGLSKGFAFVKFTSKQDAENVIKTFNGKT
LSKRTIAVDWAVSKKVYAAGGQSSATVQDGQDAKDDSSSDTDEDIEIDGKSQQAEEDGDD
SHLLEEENNQTEVNFDEEANIAKKVLQNFISPTSIGPTTSTNDFSGLPKQGKDVETILPP
DEPLGASTANKTPHDNLDKSKEINAGQSEGADDLQGTVFISNLPFDVDNKEVKQRFSAFG
EVEYFAPVLDRVTKRPKGTGFLKFKTAEAAEATVSAANVVDGLGVFLKGRQLKILKALDK
KAAHDKELEKAKKEDNDHRNLYLAKEGLIVEGTPAAAGVSVSDMSKRKGLQEKKMIKLKS
PNFHVSRTRLIVYNLPKSMSEKQLKTLCIDAVTSRATKQKPVIRQIKFLKDVKKGQVVAK
NHSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTMKLRNQKLQQQG
FNKNREDLQQNANKTELNPRDKQSRKRKSSGDTSVAGNRDVVKSKRVRGATAEEGNGSSV
SGSKDGDELKNRGARGTNSEEERDEKKNNKKEGKKLGGTKQKPKDNQEGKKLGRFGNEHS
DNAALKVGHKEDVAVRTKRRKLEDKTNQQKQTMSLQVKKKDKKNKNPAGRDAEDKLDMLI
EQYRSKFTNNSSNQTDSKQQGSKQLKKWFQS

Transcript Sequence

Gene sequence data has not been registered.